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terminal_predict.py 14.93 KB
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wenzhengxie 提交于 2019-04-19 15:39 . commit first version
# encoding=utf-8
"""
基于命令行的在线预测方法
@Author: Macan (ma_cancan@163.com)
"""
import pandas as pd
import tensorflow as tf
import numpy as np
import codecs
import pickle
import os
from datetime import time, timedelta, datetime
from run_ner import create_model, InputFeatures, InputExample
from bert import tokenization
from bert import modeling
os.environ['CUDA_VISIBLE_DEVICES'] = '0'
flags = tf.flags
FLAGS = flags.FLAGS
flags.DEFINE_bool(
"do_predict_outline", False,
"Whether to do predict outline."
)
flags.DEFINE_bool(
"do_predict_online", False,
"Whether to do predict online."
)
# init mode and session
# move something codes outside of function, so that this code will run only once during online prediction when predict_online is invoked.
is_training=False
use_one_hot_embeddings=False
batch_size=1
gpu_config = tf.ConfigProto()
gpu_config.gpu_options.allow_growth = True
sess=tf.Session(config=gpu_config)
model=None
global graph
input_ids_p, input_mask_p, label_ids_p, segment_ids_p = None, None, None, None
print(FLAGS.output_dir)
print('checkpoint path:{}'.format(os.path.join(FLAGS.output_dir, "checkpoint")))
if not os.path.exists(os.path.join(FLAGS.output_dir, "checkpoint")):
raise Exception("failed to get checkpoint. going to return ")
# 加载label->id的词典
with codecs.open(os.path.join(FLAGS.output_dir, 'label2id.pkl'), 'rb') as rf:
label2id = pickle.load(rf)
id2label = {value: key for key, value in label2id.items()}
with codecs.open(os.path.join(FLAGS.output_dir, 'label_list.pkl'), 'rb') as rf:
label_list = pickle.load(rf)
num_labels = len(label_list) + 1
graph = tf.get_default_graph()
with graph.as_default():
print("going to restore checkpoint")
#sess.run(tf.global_variables_initializer())
input_ids_p = tf.placeholder(tf.int32, [batch_size, FLAGS.max_seq_length], name="input_ids")
input_mask_p = tf.placeholder(tf.int32, [batch_size, FLAGS.max_seq_length], name="input_mask")
label_ids_p = tf.placeholder(tf.int32, [batch_size, FLAGS.max_seq_length], name="label_ids")
segment_ids_p = tf.placeholder(tf.int32, [batch_size, FLAGS.max_seq_length], name="segment_ids")
bert_config = modeling.BertConfig.from_json_file(FLAGS.bert_config_file)
(total_loss, logits, trans, pred_ids) = create_model(
bert_config, is_training, input_ids_p, input_mask_p, segment_ids_p,
label_ids_p, num_labels, use_one_hot_embeddings)
saver = tf.train.Saver()
saver.restore(sess, tf.train.latest_checkpoint(FLAGS.output_dir))
tokenizer = tokenization.FullTokenizer(
vocab_file=FLAGS.vocab_file, do_lower_case=FLAGS.do_lower_case)
def predict_online():
"""
do online prediction. each time make prediction for one instance.
you can change to a batch if you want.
:param line: a list. element is: [dummy_label,text_a,text_b]
:return:
"""
def convert(line):
feature = convert_single_example(0, line, label_list, FLAGS.max_seq_length, tokenizer, 'p')
input_ids = np.reshape([feature.input_ids],(batch_size, FLAGS.max_seq_length))
input_mask = np.reshape([feature.input_mask],(batch_size, FLAGS.max_seq_length))
segment_ids = np.reshape([feature.segment_ids],(batch_size, FLAGS.max_seq_length))
label_ids =np.reshape([feature.label_ids],(batch_size, FLAGS.max_seq_length))
return input_ids, input_mask, segment_ids, label_ids
global graph
with graph.as_default():
print(id2label)
while True:
print('input the test sentence:')
sentence = str(input())
start = datetime.now()
if len(sentence) < 2:
print(sentence)
continue
sentence = tokenizer.tokenize(sentence)
# print('your input is:{}'.format(sentence))
input_ids, input_mask, segment_ids, label_ids = convert(sentence)
feed_dict = {input_ids_p: input_ids,
input_mask_p: input_mask,
segment_ids_p:segment_ids,
label_ids_p:label_ids}
# run session get current feed_dict result
pred_ids_result = sess.run([pred_ids], feed_dict)
pred_label_result = convert_id_to_label(pred_ids_result, id2label)
print(pred_label_result)
#todo: 组合策略
result = strage_combined_link_org_loc(sentence, pred_label_result[0], True)
print('识别的实体有:{}'.format(''.join(result)))
print('Time used: {} sec'.format((datetime.now() - start).seconds))
def predict_outline():
"""
do online prediction. each time make prediction for one instance.
you can change to a batch if you want.
:param line: a list. element is: [dummy_label,text_a,text_b]
:return:
"""
def convert(line):
feature = convert_single_example(0, line, label_list, FLAGS.max_seq_length, tokenizer, 'p')
input_ids = np.reshape([feature.input_ids],(batch_size, FLAGS.max_seq_length))
input_mask = np.reshape([feature.input_mask],(batch_size, FLAGS.max_seq_length))
segment_ids = np.reshape([feature.segment_ids],(batch_size, FLAGS.max_seq_length))
label_ids =np.reshape([feature.label_ids],(batch_size, FLAGS.max_seq_length))
return input_ids, input_mask, segment_ids, label_ids
global graph
with graph.as_default():
start = datetime.now()
nlpcc_test_data = pd.read_csv("./Data/NER_Data/q_t_a_df_testing.csv")
correct = 0
test_size = nlpcc_test_data.shape[0]
nlpcc_test_result = []
for row in nlpcc_test_data.index:
question = nlpcc_test_data.loc[row,"q_str"]
entity = nlpcc_test_data.loc[row,"t_str"].split("|||")[0].split(">")[1].strip()
attribute = nlpcc_test_data.loc[row, "t_str"].split("|||")[1].strip()
answer = nlpcc_test_data.loc[row, "t_str"].split("|||")[2].strip()
sentence = str(question)
start = datetime.now()
if len(sentence) < 2:
print(sentence)
continue
sentence = tokenizer.tokenize(sentence)
input_ids, input_mask, segment_ids, label_ids = convert(sentence)
feed_dict = {input_ids_p: input_ids,
input_mask_p: input_mask,
segment_ids_p:segment_ids,
label_ids_p:label_ids}
# run session get current feed_dict result
pred_ids_result = sess.run([pred_ids], feed_dict)
pred_label_result = convert_id_to_label(pred_ids_result, id2label)
# print(pred_label_result)
#todo: 组合策略
result = strage_combined_link_org_loc(sentence, pred_label_result[0], False)
if entity in result:
correct += 1
nlpcc_test_result.append(question+"\t"+entity+"\t"+attribute+"\t"+answer+"\t"+','.join(result))
with open("./Data/NER_Data/q_t_a_testing_predict.txt", "w") as f:
f.write("\n".join(nlpcc_test_result))
print("accuracy: {}%, correct: {}, total: {}".format(correct*100.0/float(test_size), correct, test_size))
print('Time used: {} sec'.format((datetime.now() - start).seconds))
def convert_id_to_label(pred_ids_result, idx2label):
"""
将id形式的结果转化为真实序列结果
:param pred_ids_result:
:param idx2label:
:return:
"""
result = []
for row in range(batch_size):
curr_seq = []
for ids in pred_ids_result[row][0]:
if ids == 0:
break
curr_label = idx2label[ids]
if curr_label in ['[CLS]', '[SEP]']:
continue
curr_seq.append(curr_label)
result.append(curr_seq)
return result
def strage_combined_link_org_loc(tokens, tags, flag):
"""
组合策略
:param pred_label_result:
:param types:
:return:
"""
def print_output(data, type):
line = []
for i in data:
line.append(i.word)
print('{}: {}'.format(type, ', '.join(line)))
def string_output(data):
line = []
for i in data:
line.append(i.word)
return line
params = None
eval = Result(params)
if len(tokens) > len(tags):
tokens = tokens[:len(tags)]
person, loc, org = eval.get_result(tokens, tags)
if flag:
if len(loc) != 0:
print_output(loc, 'LOC')
if len(person) != 0:
print_output(person, 'PER')
if len(org) != 0:
print_output(org, 'ORG')
person_list = string_output(person)
person_list.extend(string_output(loc))
person_list.extend(string_output(org))
return person_list
def convert_single_example(ex_index, example, label_list, max_seq_length, tokenizer, mode):
"""
将一个样本进行分析,然后将字转化为id, 标签转化为id,然后结构化到InputFeatures对象中
:param ex_index: index
:param example: 一个样本
:param label_list: 标签列表
:param max_seq_length:
:param tokenizer:
:param mode:
:return:
"""
label_map = {}
# 1表示从1开始对label进行index化
for (i, label) in enumerate(label_list, 1):
label_map[label] = i
# 保存label->index 的map
if not os.path.exists(os.path.join(FLAGS.output_dir, 'label2id.pkl')):
with codecs.open(os.path.join(FLAGS.output_dir, 'label2id.pkl'), 'wb') as w:
pickle.dump(label_map, w)
tokens = example
# tokens = tokenizer.tokenize(example.text)
# 序列截断
if len(tokens) >= max_seq_length - 1:
tokens = tokens[0:(max_seq_length - 2)] # -2 的原因是因为序列需要加一个句首和句尾标志
ntokens = []
segment_ids = []
label_ids = []
ntokens.append("[CLS]") # 句子开始设置CLS 标志
segment_ids.append(0)
# append("O") or append("[CLS]") not sure!
label_ids.append(label_map["[CLS]"]) # O OR CLS 没有任何影响,不过我觉得O 会减少标签个数,不过拒收和句尾使用不同的标志来标注,使用LCS 也没毛病
for i, token in enumerate(tokens):
ntokens.append(token)
segment_ids.append(0)
label_ids.append(0)
ntokens.append("[SEP]") # 句尾添加[SEP] 标志
segment_ids.append(0)
# append("O") or append("[SEP]") not sure!
label_ids.append(label_map["[SEP]"])
input_ids = tokenizer.convert_tokens_to_ids(ntokens) # 将序列中的字(ntokens)转化为ID形式
input_mask = [1] * len(input_ids)
# padding, 使用
while len(input_ids) < max_seq_length:
input_ids.append(0)
input_mask.append(0)
segment_ids.append(0)
# we don't concerned about it!
label_ids.append(0)
ntokens.append("**NULL**")
# label_mask.append(0)
# print(len(input_ids))
assert len(input_ids) == max_seq_length
assert len(input_mask) == max_seq_length
assert len(segment_ids) == max_seq_length
assert len(label_ids) == max_seq_length
# assert len(label_mask) == max_seq_length
# 结构化为一个类
feature = InputFeatures(
input_ids=input_ids,
input_mask=input_mask,
segment_ids=segment_ids,
label_ids=label_ids,
# label_mask = label_mask
)
return feature
class Pair(object):
def __init__(self, word, start, end, type, merge=False):
self.__word = word
self.__start = start
self.__end = end
self.__merge = merge
self.__types = type
@property
def start(self):
return self.__start
@property
def end(self):
return self.__end
@property
def merge(self):
return self.__merge
@property
def word(self):
return self.__word
@property
def types(self):
return self.__types
@word.setter
def word(self, word):
self.__word = word
@start.setter
def start(self, start):
self.__start = start
@end.setter
def end(self, end):
self.__end = end
@merge.setter
def merge(self, merge):
self.__merge = merge
@types.setter
def types(self, type):
self.__types = type
def __str__(self) -> str:
line = []
line.append('entity:{}'.format(self.__word))
line.append('start:{}'.format(self.__start))
line.append('end:{}'.format(self.__end))
line.append('merge:{}'.format(self.__merge))
line.append('types:{}'.format(self.__types))
return '\t'.join(line)
class Result(object):
def __init__(self, config):
self.config = config
self.person = []
self.loc = []
self.org = []
self.others = []
def get_result(self, tokens, tags, config=None):
# 先获取标注结果
self.result_to_json(tokens, tags)
return self.person, self.loc, self.org
def result_to_json(self, string, tags):
"""
将模型标注序列和输入序列结合 转化为结果
:param string: 输入序列
:param tags: 标注结果
:return:
"""
item = {"entities": []}
entity_name = ""
entity_start = 0
idx = 0
last_tag = ''
for char, tag in zip(string, tags):
if tag[0] == "S":
self.append(char, idx, idx+1, tag[2:])
item["entities"].append({"word": char, "start": idx, "end": idx+1, "type":tag[2:]})
elif tag[0] == "B":
if entity_name != '':
self.append(entity_name, entity_start, idx, last_tag[2:])
item["entities"].append({"word": entity_name, "start": entity_start, "end": idx, "type": last_tag[2:]})
entity_name = ""
entity_name += char
entity_start = idx
elif tag[0] == "I":
entity_name += char
elif tag[0] == "O":
if entity_name != '':
self.append(entity_name, entity_start, idx, last_tag[2:])
item["entities"].append({"word": entity_name, "start": entity_start, "end": idx, "type": last_tag[2:]})
entity_name = ""
else:
entity_name = ""
entity_start = idx
idx += 1
last_tag = tag
if entity_name != '':
self.append(entity_name, entity_start, idx, last_tag[2:])
item["entities"].append({"word": entity_name, "start": entity_start, "end": idx, "type": last_tag[2:]})
return item
def append(self, word, start, end, tag):
if tag == 'LOC':
self.loc.append(Pair(word, start, end, 'LOC'))
elif tag == 'PER':
self.person.append(Pair(word, start, end, 'PER'))
elif tag == 'ORG':
self.org.append(Pair(word, start, end, 'ORG'))
else:
self.others.append(Pair(word, start, end, tag))
if __name__ == "__main__":
if FLAGS.do_predict_outline:
predict_outline()
if FLAGS.do_predict_online:
predict_online()
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