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尧小飞/annoXCRtools

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NAMESPACE 1.54 KB
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姚盟成 提交于 2020-08-28 17:30 . 修改了几个bug
# Generated by roxygen2: do not edit by hand
export(all_samples_tcr)
export(cell_vdj)
export(circ_plot)
export(circlize_plot)
export(clusters)
export(combine_gene_xcr)
export(hello)
export(integration)
export(mkdirs)
export(mkdirs_over)
export(qc_pca_plot)
export(read_onesample2SeuratObject)
export(sample2SeuratObject_list)
export(tcr_heatmapplot)
export(top10_cdr3_plot)
export(trc)
export(umap_plot)
importFrom(Seurat,AddMetaData)
importFrom(Seurat,CombinePlots)
importFrom(Seurat,CreateSeuratObject)
importFrom(Seurat,DefaultAssay)
importFrom(Seurat,DimHeatmap)
importFrom(Seurat,DimPlot)
importFrom(Seurat,ElbowPlot)
importFrom(Seurat,FeatureScatter)
importFrom(Seurat,FindClusters)
importFrom(Seurat,FindIntegrationAnchors)
importFrom(Seurat,FindNeighbors)
importFrom(Seurat,FindVariableFeatures)
importFrom(Seurat,Idents)
importFrom(Seurat,IntegrateData)
importFrom(Seurat,JackStraw)
importFrom(Seurat,JackStrawPlot)
importFrom(Seurat,LabelPoints)
importFrom(Seurat,NormalizeData)
importFrom(Seurat,PercentageFeatureSet)
importFrom(Seurat,Read10X)
importFrom(Seurat,RunPCA)
importFrom(Seurat,RunUMAP)
importFrom(Seurat,ScaleData)
importFrom(Seurat,ScoreJackStraw)
importFrom(Seurat,VariableFeaturePlot)
importFrom(Seurat,VariableFeatures)
importFrom(Seurat,VizDimLoadings)
importFrom(Seurat,VlnPlot)
importFrom(circlize,chordDiagram)
importFrom(circlize,circos.par)
importFrom(circlize,rand_color)
importFrom(cowplot,plot_grid)
importFrom(data.table,fread)
importFrom(dplyr,arrange)
importFrom(ggplot2,theme)
importFrom(pheatmap,pheatmap)
importFrom(plyr,mapvalues)
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https://gitee.com/yao_xiao_fei2/annoxcrtools.git
git@gitee.com:yao_xiao_fei2/annoxcrtools.git
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annoxcrtools
annoXCRtools
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