A tool designed to provide fast all-in-one preprocessing for FastQ files. This tool is developed in C++ with multithreading supported to afford high performance.
Reading/writing BCF2/VCF/gVCF files and calling/filtering/summarising SNP
mpv is a free (as in freedom) media player for the command line
backintime is a simple backup tool provides a CLI as well as a Qt5 GUI
Tools (written in C using htslib) for manipulating next-generation sequencing data
C library for high-throughput sequencing data formats
MariaDB and MySQL driver for the Perl5 Database Interface (DBI)