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buleiba/TwoSampleMR

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Gibran Hemani 提交于 2020-06-19 15:01 . updates
# Generated by roxygen2: do not edit by hand
export("%>%")
export(Isq)
export(add_metadata)
export(add_rsq)
export(allele_frequency)
export(available_outcomes)
export(clump_data)
export(combine_all_mrresults)
export(combine_data)
export(contingency)
export(convert_outcome_to_exposure)
export(dat_to_MRInput)
export(dat_to_RadialMR)
export(default_parameters)
export(directionality_test)
export(enrichment)
export(enrichment_method_list)
export(estimate_trait_sd)
export(extract_instruments)
export(extract_outcome_data)
export(fishers_combined_test)
export(forest_plot)
export(forest_plot_1_to_many)
export(format_1_to_many)
export(format_aries_mqtl)
export(format_data)
export(format_gtex_eqtl)
export(format_gwas_catalog)
export(format_metab_qtls)
export(format_mr_results)
export(format_proteomic_qtls)
export(generate_odds_ratios)
export(get_p_from_r2n)
export(get_population_allele_frequency)
export(get_r_from_lor)
export(get_r_from_pn)
export(harmonise_data)
export(ld_matrix)
export(make_dat)
export(mr)
export(mr_density_plot)
export(mr_egger_regression)
export(mr_egger_regression_bootstrap)
export(mr_forest_plot)
export(mr_funnel_plot)
export(mr_heterogeneity)
export(mr_ivw)
export(mr_ivw_fe)
export(mr_ivw_mre)
export(mr_ivw_radial)
export(mr_leaveoneout)
export(mr_leaveoneout_plot)
export(mr_median)
export(mr_meta_fixed)
export(mr_meta_fixed_simple)
export(mr_meta_random)
export(mr_method_list)
export(mr_mode)
export(mr_moe)
export(mr_penalised_weighted_median)
export(mr_pleiotropy_test)
export(mr_raps)
export(mr_report)
export(mr_rucker)
export(mr_rucker_bootstrap)
export(mr_rucker_cooksdistance)
export(mr_rucker_jackknife)
export(mr_scatter_plot)
export(mr_sign)
export(mr_simple_median)
export(mr_simple_mode)
export(mr_simple_mode_nome)
export(mr_singlesnp)
export(mr_steiger)
export(mr_steiger2)
export(mr_two_sample_ml)
export(mr_uwr)
export(mr_wald_ratio)
export(mr_weighted_median)
export(mr_weighted_mode)
export(mr_weighted_mode_nome)
export(mr_wrapper)
export(mv_basic)
export(mv_extract_exposures)
export(mv_extract_exposures_local)
export(mv_harmonise_data)
export(mv_ivw)
export(mv_lasso_feature_selection)
export(mv_multiple)
export(mv_residual)
export(mv_subset)
export(power_prune)
export(read_exposure_data)
export(read_outcome_data)
export(run_mr_presso)
export(run_mrmix)
export(size.prune)
export(sort_1_to_many)
export(split_exposure)
export(split_outcome)
export(standardise_units)
export(steiger_filtering)
export(steiger_sensitivity)
export(subset_on_method)
export(trim)
export(weighted_median)
export(weighted_median_bootstrap)
importFrom(glmnet,coef.glmnet)
importFrom(glmnet,cv.glmnet)
importFrom(grDevices,dev.off)
importFrom(grDevices,pdf)
importFrom(grDevices,rgb)
importFrom(lattice,wireframe)
importFrom(magrittr,"%>%")
importFrom(mr.raps,mr.raps)
importFrom(stats,binom.test)
importFrom(stats,coefficients)
importFrom(stats,cooks.distance)
importFrom(stats,cor)
importFrom(stats,cov)
importFrom(stats,density)
importFrom(stats,df)
importFrom(stats,influence.measures)
importFrom(stats,ks.test)
importFrom(stats,lm)
importFrom(stats,mad)
importFrom(stats,median)
importFrom(stats,optim)
importFrom(stats,pchisq)
importFrom(stats,pf)
importFrom(stats,pnorm)
importFrom(stats,pt)
importFrom(stats,qchisq)
importFrom(stats,qf)
importFrom(stats,qnorm)
importFrom(stats,quantile)
importFrom(stats,residuals)
importFrom(stats,rnorm)
importFrom(stats,sd)
importFrom(stats,shapiro.test)
importFrom(stats,var)
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TwoSampleMR
TwoSampleMR
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