iDINGO R package to estimate group-specific integrative networks and make inference on the integrative differential networks, considering the biological hierarchy among the platforms
SEMA is a graphical hypothesis testing platform for multidimensional cancer genomics data
Functional analysis of miRNA including 1) miRNA target prediction, 2) correlation analyses between miRNA-target gene on mRNA (the cancer genome atlas) and protein levels (The cancer proteome atlas) 3) functional enrichment of significantly (positively and negatively) correlated miRNA targets.
Shiny application for visualisation and analysis of intact protein MS 2D maps.
pcaExplorer - Interactive exploration of Principal Components of Samples and Genes in RNA-seq data
Scripts for generating integrated dataset from publically available data sources to evaluate known genetic associations evidence of varying disease areas and supporting information. The integrated dataset is also included.
Trendy: Segmented regression analysis of expression dynamics for high-throughput ordered profiling experiments