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Package: ggtree
Type: Package
Title: an R package for visualization of tree and annotation data
Version: 3.7.1
Authors@R: c(
person("Guangchuang", "Yu", email = "guangchuangyu@gmail.com", role = c("aut", "cre", "cph"),
comment = c(ORCID = "0000-0002-6485-8781")),
person("Tommy Tsan-Yuk", "Lam", email = "tylam.tommy@gmail.com", role = c("aut", "ths")),
person("Shuangbin", "Xu", email = "xshuangbin@163.com", role = "aut",
comment = c(ORCID="0000-0003-3513-5362")),
person("Lin", " Li", email = "williamlee2220@qq.com", role = "ctb"),
person("Bradley", "Jones", email = "bjones@cfenet.ubc.ca", role = "ctb"),
person("Justin", "Silverman", email = "jsilve24@gmail.com", role = "ctb"),
person("Watal M.", "Iwasaki", email = "heavy.watal@gmail.com", role = "ctb"),
person("Yonghe", "Xia", email = "xiayh17@gmail.com", role = "ctb"),
person("Ruizhu", "Huang", email = "ruizhuRH@gmail.com", role = "ctb")
)
Maintainer: Guangchuang Yu <guangchuangyu@gmail.com>
Description: 'ggtree' extends the 'ggplot2' plotting system which implemented
the grammar of graphics. 'ggtree' is designed for visualization and annotation
of phylogenetic trees and other tree-like structures with their annotation data.
Depends:
R (>= 3.5.0)
Imports:
ape,
aplot,
dplyr,
ggplot2 (> 3.3.6),
grid,
magrittr,
methods,
purrr,
rlang,
ggfun (>= 0.0.6),
yulab.utils,
tidyr,
tidytree (>= 0.3.9),
treeio (>= 1.8.0),
utils,
scales,
stats
Suggests:
emojifont,
ggimage,
ggplotify,
shadowtext,
grDevices,
knitr,
prettydoc,
rmarkdown,
testthat,
tibble,
glue
Remotes:
GuangchuangYu/treeio
VignetteBuilder: knitr
ByteCompile: true
Encoding: UTF-8
License: Artistic-2.0
URL: https://www.amazon.com/Integration-Manipulation-Visualization-Phylogenetic-Computational-ebook/dp/B0B5NLZR1Z/ (book), http://onlinelibrary.wiley.com/doi/10.1111/2041-210X.12628 (paper)
BugReports: https://github.com/YuLab-SMU/ggtree/issues
Packaged: 2014-12-03 08:16:14 UTC; root
biocViews: Alignment, Annotation, Clustering, DataImport,
MultipleSequenceAlignment, Phylogenetics, ReproducibleResearch, Software, Visualization
RoxygenNote: 7.2.1
Roxygen: list(markdown = TRUE)
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